Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015854698.1_cds_XP_016512648.1_25272
CDS Infomation

[gene=LOC107829695] [db_xref=GeneID:107829695] [protein=protein CbxX, chromosomal-like] [protein_id=XP_016512648.1] [location=complement(join(70737..71288,71371..71510,72002..72305,72385..72495,72587..72685,72812..72922,74342..74479))] [gbkey=CDS]
Sequence

ATGCAGAAGCCGAGGGATCGACGGTCAAGATCCTCAAGACCCATAACTATTCATAGCTTA
GCACAATCTGGAGACGTTTTTGCCTTTCAAAAGTTGCTCAATGACAACCCTTCTCTTCTT
AATGAACGTAACCCTGTTATGGTGCAGACGCCTCTTCATGTTGCTGCTGGTTACAATAAT
GTGGAAATACTCAAGTTTTTACTTGGTTGGCCAGGCCCAGAAAAGGTGGAGTTGGAAGCC
AAGAACATGTATGGAGAGACTCCATTGCACATGGCAGCCAAGAATGGTTGTAATGAAGCC
ACAAAAGTGCTTCTTGCTCATGGTGCTCATGTTGAAGCCAAAGCCAATAATGGGATGACT
CCGTTGCACCTTGCTGTTTGGCATTCACTACGAGCCGAAGACTATTCAACAGTAAAGACA
TTGTTGGAGTATGACGCGAATTGTAGTGCTGAAGACAATGAGGGCATGACTCCTATAAAT
CATCTCTCTCAAGGCCCTGGAAATGAAAAATTGCGTGAACTTCTCCACCGGTATCTTGAA
GAACAAAGAAAACGTAAAGCCATTGAAGCATGCAGCCAGACCAAAGCTAAAATGGATGAA
CTTGAAAATGAATTATCTACAATAGTGGGATTAGACGAACTTAAACTGCAGCTCCGCAAA
TGGGCAAAGGGGATGCTCTTGGATGAGAGGCGTAAGGCCCTAGGGCTTAAAGTTGGTGCA
AGAAGACCGCCCCATATGGCTTTCCTCGGAAACCCTGGAACAGGAAAAACTATGGTTGCT
CGCATTCTTGGAAAATTACTTCATATGGTGGGGATTCTTCCCACTGACAACGTGACCGAG
GTGCAGAGAACAGATCTGGTTGGTGAATTTGTTGGTCATACAGGACCGAAGACAAGGAGA
AAGATCCAAGAAGCTGAAGGGGGGATTCTTTTCGTTGATGAAGCCTATCGATTAATACCT
ATGCAGAAATCAGATGATAAGGACTATGGTTTGGAAGCACTAGAGGAGATAATGTCAGTC
ATGGATAGCGGAAAAATTGTAGTAATTTTTGCAGGTTACAGTGAACCAATGAAGCGTGTG
ATCACTTCTAACGAAGGTTTCTGTAGAAGAGTCACAAAGTTTTTCCAATTTGACAACTTT
AGCTCTGAAGACCTTGCCAAGATTCTTCATCTTAAGATGACCAATCAAGCTGATAGTAGC
TTGCTATATGGGTTTAAGTTGCATCCTTCATGTACTGTTGACACTGTTTCATCACTTATC
AAGGACGAAACCACTGAAAAGCAGCGCAAGGAGATGAATGGAGGTCTAGTGGATCCAATG
CTAGTTAATGCAAGAGAGAATTTGGATCTCAGACTCAGTTTTGACTGCATAGACTCAGAC
GAACTATCAACGATTACTTTAGAGGATTTAAAAACTGGTCTTCAGTTGCTGTCGCAAACA
GGAGTTGCAGCTTAG

Peptide Sequence

PEP ID

XP_016512648.1
PEP Infomation

PREDICTED: protein CbxX, chromosomal-like [Nicotiana tabacum]
Sequence

MQKPRDRRSRSSRPITIHSLAQSGDVFAFQKLLNDNPSLLNERNPVMVQTPLHVAAGYNN
VEILKFLLGWPGPEKVELEAKNMYGETPLHMAAKNGCNEATKVLLAHGAHVEAKANNGMT
PLHLAVWHSLRAEDYSTVKTLLEYDANCSAEDNEGMTPINHLSQGPGNEKLRELLHRYLE
EQRKRKAIEACSQTKAKMDELENELSTIVGLDELKLQLRKWAKGMLLDERRKALGLKVGA
RRPPHMAFLGNPGTGKTMVARILGKLLHMVGILPTDNVTEVQRTDLVGEFVGHTGPKTRR
KIQEAEGGILFVDEAYRLIPMQKSDDKDYGLEALEEIMSVMDSGKIVVIFAGYSEPMKRV
ITSNEGFCRRVTKFFQFDNFSSEDLAKILHLKMTNQADSSLLYGFKLHPSCTVDTVSSLI
KDETTEKQRKEMNGGLVDPMLVNARENLDLRLSFDCIDSDELSTITLEDLKTGLQLLSQT
GVAA

Transcript Sequence

Gene sequence data has not been registered.